Preview

Russian Journal of Transplantology and Artificial Organs

Advanced search

Nanostructural organization of skeletal muscle myocytes revealed by scanning probe nanotomography

https://doi.org/10.15825/1995-1191-2026-2-83-93

Abstract

Objective: to perform a statistical analysis of the angular orientations of hexagonal myofilament lattices in rat skeletal muscle myofibrils using scanning probe nanotomography (SPN). Materials and methods. Skeletal muscle tissue samples were obtained from healthy Wistar rats for the study. Specimens of rat lumbar skeletal muscle fibers were embedded in epoxy resin. After sectioning with an ultramicrotome, the specimen surfaces were examined using SPN. Analysis of the resulting images of sarcomere cross-sections enabled the determination of the angular orientations of the hexagonal lattices formed by myosin myofilaments. Results. A method was developed to calculate the angular orientations of hexagonal lattices based on moiré patterns observed in images of sarcomere cross-sections. Statistical analysis of the obtained images showed that the relative rotations of the hexagonal lattices do not follow a normal distribution according to the Kolmogorov–Smirnov test (p = 0.3). The results indicate that the orientations of the lattices vary randomly along the myofibrils. Conclusion. Analysis of lattice orientations in adjacent sarcomeres made it possible, for the first time, to obtain and statistically evaluate data on their mutual orientations along myofibrils. The results revealed a low degree of alignment in the orientations of myosin filaments within myofibrils of rat skeletal muscle. The proposed methods and algorithms may be further applied to studies of the nanostructural organization of myocytes and cardiomyocytes in different species.

About the Authors

A. E. Efimov
Shumakov National Medical Research Center of Transplantology and Artificial Organs
Russian Federation

Anton E. Efimov.

Moscow



T. K. Milenin
Moscow Institute of Physics and Technology
Russian Federation

Timofey K. Milenin.

Moscow



E. I. Podbolotova
Shumakov National Medical Research Center of Transplantology and Artificial Organs
Russian Federation

Ekaterina I. Podbolotova.

Moscow



N. V. Grudinin
Shumakov National Medical Research Center of Transplantology and Artificial Organs
Russian Federation

Nikita V. Grudinin.

Moscow



O. I. Agapova
Shumakov National Medical Research Center of Transplantology and Artificial Organs
Russian Federation

Olga I. Agapova.

Moscow



I. I. Agapov
Shumakov National Medical Research Center of Transplantology and Artificial Organs
Russian Federation

Igor I. Agapov.

1, Shchukinskaya str., Moscow, 123182

Phone: (499) 190-66-19



References

1. Luther PK, Squire JM. Three-dimensional structure of the vertebrate muscle A-band: II. The myosin filament superlattice. J Mol Biol. 1980; 141 (4): 409–439. doi: 10.1016/0022-2836(80)90254-5.

2. Al‑Khayat HA, Morris EP, Kensler RW, Squire JM. 3D structure of relaxed fish muscle myosin filaments by single particle analysis. J Struct Biol. 2006; 155 (2): 202–217. doi: 10.1016/j.jsb.2006.01.014.

3. Bordas J, Svensson A, Rothery M, Lowy J, Diakun GP, Boesecke P. Extensibility and symmetry of actin filaments in contracting muscles. Biophys J. 1999; 77 (6): 3197–3207. doi: 10.1016/S0006-3495(99)77150-X.

4. Squire J. Special Issue: The actin-myosin interaction in muscle: background and overview. Int J Mol Sci. 2019; 20 (22): 5715. doi: 10.3390/ijms20225715.

5. Henderson CA, Gomez CG, Novak SM, Mi‑Mi L, Gregorio CC. Overview of the muscle cytoskeleton. Compr Physiol. 2017; 7 (3): 891–944. doi: 10.1002/cphy.c160033.

6. Mukund K, Subramaniam S. Skeletal muscle: a review of molecular structure and function, in health and disease. WIREs Syst Biol Med. 2020; 12 (1): e1462. doi: 10.1002/wsbm.1462.

7. Harris SP. Making waves: A proposed new role for myosin-binding protein C in regulating oscillatory contractions in vertebrate striated muscle. J Gen Physiol. 2021; 153 (3): e202012729. doi: 10.1085/jgp.202012729.

8. Mun JY, Gulick J, Robbins J, Woodhead J, Lehman W, Craig R. Electron microscopy and 3D reconstruction of F-actin decorated with cardiac myosin-binding protein C (cMyBP-C). J Mol Biol. 2011; 410 (2): 214–225. doi: 10.1016/j.jmb.2011.05.010.

9. Müller WG, Heymann JB, Nagashima K, Guttmann P, Werner S, Rehbein S et al. Towards an atlas of mammalian cell ultrastructure by cryo soft X-ray tomography. J Struct Biol. 2012; 177 (2): 179–192. doi: 10.1016/j.jsb.2011.11.025.

10. Narayan K, Subramaniam S. Focused ion beams in biology. Nature Methods. 2015; 12 (11): 1021–1031. doi: 10.1038/nmeth.3623.

11. Sulkin MS, Yang F, Holzem KM, Van Leer B, Bugge C, Laughner JI et al. Nanoscale three-dimensional imaging of the human myocyte. J Struct Biol. 2014; 188 (1): 55–60. doi: 10.1016/j.jsb.2014.08.005.

12. Glancy B, Hartnell LM, Malide D, Yu ZX, Combs CA, Connelly PS et al. Mitochondrial reticulum for cellular energy distribution in muscle. Nature. 2015; 523 (7562): 617–620. doi: 10.1038/nature14614.

13. Dahl R, Larsen S, Dohlmann TL, Qvortrup K, Helge JW, Dela F et al. Three-dimensional reconstruction of the human skeletal muscle mitochondrial network as a tool to assess mitochondrial content and structural organization. Acta Physiol (Oxf). 2015; 213 (1): 145–155. doi: 10.1111/apha.12289.

14. Luther PK. The vertebrate muscle Z-disc: sarcomere anchor for structure and signalling. J Muscle Res Cell Motil. 2009; 30 (5–6): 171–185. doi: 10.1007/s10974-009-9189-6.

15. Burgoyne T, Heumann JM, Morris EP, Knupp C, Liu J, Reedy MK et al. Three-dimensional structure of the basketweave Z-band in midshipman fish sonic muscle. PNAS. 2019; 116 (31): 15534–15539. doi: 10.1073/pnas.1902235116.

16. Rusu M, Hu Z, Taylor KA, Trinick J. Structure of isolated Z-disks from honeybee flight muscle. J Muscle Res Cell Motil. 2017; 38 (2): 241–250. doi: 10.1007/s10974-017-9477-5.

17. Oda T, Yanagisawa H. Cryo-electron tomography of cardiac myofibrils reveals a 3D lattice spring within the Z-discs. Commun Biol. 2020; 3 (1): 585. doi: 10.1038/s42003-020-01321-5.

18. Zoghbi ME, Woodhead JL, Moss RL, Craig R. Three-dimensional structure of vertebrate cardiac muscle myosin filaments. PNAS. 2008; 105 (7): 2386–2390. doi: 10.1073/pnas.0708912105.

19. Al‑Khayat HA, Morris EP, Kensler RW, Squire JM. Myosin filament 3D structure in mammalian cardiac muscle. J Struct Biol. 2008; 163 (2): 117–126. doi: 10.1016/j.jsb.2008.03.011.

20. Burbaum L, Schneider J, Scholze S, Böttcher RT, Baumeister W, Schwille P et al. Molecular-scale visualization of sarcomere contraction within native cardiomyocytes. Nat Commun. 2021; 12 (1): 4086. doi: 10.1038/s41467-021-24049-0.

21. Iwamoto H, Nishikawa Y, Wakayama J, Fujisawa T. Direct X-ray observation of a single hexagonal myofilament lattice in native myofibrils of striated muscle. Biophys J. 2002; 83 (2): 1074–1081. doi: 10.1016/S0006-3495(02)75231-4.

22. Iwamoto H, Inoue K, Yagi N. Evolution of long-range myofibrillar crystallinity in insect flight muscle as examined by Xray cryomicrodiffraction. Proc R Soc B. 2006; 273 (1587): 677–685. doi: 10.1098/rspb.2005.3389.

23. Tune TC, Ma W, Irving T, Sponberg S. Nanometer-scale structure differences in the myofilament lattice spacing of two cockroach leg muscles correspond to their different functions. Journal of Experimental Biology. 2020; 223 (Pt 9): jeb212829. doi: 10.1242/jeb.212829.

24. Ma W, Gong H, Jani V, Lee KH, Landim‑Vieira M, Papadaki M et al. Myofibril orientation as a metric for characterizing heart disease. Biophys J. 2022; 121 (4): 565–574. doi: 10.1016/j.bpj.2022.01.009.

25. Matsko N, Mueller M. AFM of biological material embedded in epoxy resin. J Struct Biol. 2004; 146 (3): 334–343. doi: 10.1016/j.jsb.2004.01.010.

26. Traeger L, Mackenzie J, Epstein H, Goldstein M. Transition in the thin-filament arrangement in rat skeletal muscle. J Muscle Res Cell Motil. 1983; 4 (3): 353–366. doi: 10.1007/BF00712001.

27. Efimov AE, Moisenovich MM, Bogush VG, Agapov II. 3D nanostructural analysis of silk fibroin and recombinant spidroin 1 scaffolds by scanning probe nanotomography. RSC Adv. 2014; 4: 60943–60947. doi: 10.1039/c4ra08341e.

28. Efimov AE, Agapova OI, Safonova LA, Bobrova MM, Parfenov VA, Koudan EV et al. 3D scanning probe nanotomography of tissue spheroid fibroblasts interacting with electrospun polyurethane scaffold. Express Polymer Letters. 2019; 13 (7): 632–641. doi: 10.3144/expresspolymlett.2019.53.

29. Balashov V, Efimov A, Agapova O, Pogorelov A, Agapov I, Agladze K. High resolution 3D microscopy study of cardiomyocytes on polymer scaffold nanofibers reveals formation of unusual sheathed structure. Acta Biomaterialia. 2018; 68: 214–222. doi: 10.1016/j.act-bio.2017.12.031.

30. Lindskog C, Linné J, Fagerberg L, Hallström BM, Sundberg CJ, Lindholm M et al. The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling. BMC Genomics. 2015; 16 (1): 475. doi: 10.1186/s12864-015-1686-y.


Review

For citations:


Efimov A.E., Milenin T.K., Podbolotova E.I., Grudinin N.V., Agapova O.I., Agapov I.I. Nanostructural organization of skeletal muscle myocytes revealed by scanning probe nanotomography. Russian Journal of Transplantology and Artificial Organs. 2026;28(2):83-93. (In Russ.) https://doi.org/10.15825/1995-1191-2026-2-83-93

Views: 52

JATS XML


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 1995-1191 (Print)